You are correct, the screws holding the 2 transfer covers together are now too short, what I did was make some new bolts from some 1.6 mm threaded bar I had and glued a nut to one end fed it through the now longer holes and put a washer and nut on the other end which can be easily removed for any maintenance

What i did when adding the extra rear section was to make a plate which fits snuggly between the c channel, I then drilled holes at either end of the bridging plate and through the original chassis ( 1 into the original frame and 1 into the new added section ) when bolted together it is very strong, hope this helps

Cheers, Lee.